Oct 20, 2008 at 10:11am ET by Barry Schwartz
The Google Webmaster Central Blog has a post on common questions sent to them about data issues found in Google Webmaster Tools. The short answer that Google gives is that if the data is off, then it might be due to your site being listed in Google as both the www and non-www and also subdomains being listed as unique domains.
Google may consider www.example.com different than example.com. You may own example.com and example.org and Google will consider those individually. You may want Google to group subdomain.example.com with example.com and they may not being doing so.
Google offers tips on how to get the most out of your reports:
Still have issues, join the Google Webmaster Help Group and hopefully a Googler can help you with your specific issue.
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